5M0R

Cryo-EM reconstruction of the maedi-visna virus (MVV) strand transfer complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.2 Å
  • Aggregation State: Particle
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 5M0R

Classification: HYDROLASE

Total Structure Weight: 575736.44


Macromolecule Entities
Molecule Chains Length Organism Details
integrase A, B, C..., D, E, F, G, H, I, J, K, L, M, N, O, PA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P 281 Visna/maedi virus EC#: 2.7.7 IUBMB 2.7.7.49 IUBMB 3.1 IUBMB 3.1.13.2 IUBMB 3.1.26.13 IUBMB 3.4.23 IUBMB 3.6.1.23 IUBMB
Fragment: UNP residues 821-1101
Gene Name(s): pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
vDNA, non-transfered strand Q, S 21 Visna/maedi virus
vDNA-tDNA, transferred strand, joined to a model tDNA R, T 50 Visna/maedi virus
tDNA U, V 23 Synthetic construct


Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.2 Å
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-10-05
  • Released Date: 2017-01-18
  • Deposition author(s): Pye, V.E., Ballandras-Colas, A., Maskell, D., Locke, J., Kotecha, A., Costa, A., Cherepanov, P.

Revision History

  • Version 1_0: 2017-01-18

    Type: Initial release

  • Version 1_1: 2017-01-25

    Type: Source and taxonomy

  • Version 1_2: 2017-08-02

    Type: Data collection, Derived calculations