5KVG

Zika specific antibody, ZV-67, bound to ZIKA envelope DIII


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.148

Literature

Macromolecules
Sequence Display for 5KVG

Classification: VIRAL PROTEIN / IMMUNE SYSTEM

Total Structure Weight: 58850.65

Macromolecule Entities
Molecule Chains Length Organism Details
ZIKA Envelope DIII E 110 Zika virus Fragment: UNP residues 589-697
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ZV-67 Antibody Fab Light Chain L 214 Mus musculus
ZV-67 Antibody Fab Heavy Chain H 219 Mus musculus

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

H CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
H L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.148
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 73.11 α = 90.00
b = 82.93 β = 90.00
c = 93.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-07-14
  • Released Date: 2016-08-03
  • Deposition author(s): Zhao, H., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2016-08-10
    Type: Database references
  • 2016-08-24
    Type: Database references