Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis
Abendroth, J., Fox III, D., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Aldehyde dehydrogenase | 485 | Burkholderia vietnamiensis G4 | Mutation(s): 0  Gene Names: Bcep1808_4170 | ||
UniProt | |||||
Find proteins for A4JLJ7 (Burkholderia vietnamiensis (strain G4 / LMG 22486)) Explore A4JLJ7  Go to UniProtKB:  A4JLJ7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A4JLJ7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NDP Query on NDP | CA [auth D], E [auth A], L [auth B], U [auth C] | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H30 N7 O17 P3 ACFIXJIJDZMPPO-NNYOXOHSSA-N | |||
MPD Query on MPD | AA [auth D] BA [auth D] GA [auth D] I [auth A] J [auth A] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
MRD Query on MRD | EA [auth D], G [auth A], HA [auth D], N [auth B], W [auth C] | (4R)-2-METHYLPENTANE-2,4-DIOL C6 H14 O2 SVTBMSDMJJWYQN-RXMQYKEDSA-N | |||
ACT Query on ACT | DA [auth D] FA [auth D] H [auth A] M [auth B] P [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
MG Query on MG | F [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 83.64 | α = 90 |
b = 145.08 | β = 90 |
c = 170.03 | γ = 90 |
Software Name | Purpose |
---|---|
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MOLREP | phasing |
ARP | model building |
Coot | model building |