5IEV

Crystal structure of BAY 1000394 (Roniciclib) bound to CDK2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 5IEV

Classification: TRANSFERASE

Total Structure Weight: 34408.95

Macromolecule Entities
Molecule Chains Length Organism Details
Cyclin-dependent kinase 2 A 298 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
R0N
Query on R0N

A Roniciclib
BAY 1000394 (Synonym)
C18 H23 F3 N4 O3 S
ZEHGENUDEXWDNX-GHMZBOCLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.195
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 53.78 α = 90.00
b = 71.81 β = 90.00
c = 72.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-02-25
  • Released Date: 2016-04-27
  • Deposition author(s): Ayaz, P., Andres, D., Kwiatkowski, D.A., Kolbe, C., Lienau, P., Siemeister, G., Luecking, U., Stegmann, C.M.

Revision History

  • Version 1_0: 2016-04-27

    Type: Initial release

  • Version 1_1: 2016-05-04

    Type: Database references

  • Version 1_2: 2016-06-29

    Type: Database references