5I92

Crystal structure of Glutamate-1-semialdehyde 2,1- aminomutase (GSA) from Pseudomonas aeruginosa

PDB DOI: https://doi.org/10.2210/pdb5I92/pdb

Classification: ISOMERASE
Organism(s): Pseudomonas aeruginosa PAO1
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2016-02-19 Released: 2016-03-23
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.75 Å
R-Value Free: 0.179
R-Value Work: 0.153
R-Value Observed: 0.153

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Glutamate-1-semialdehyde 2,1- aminomutase (GSA) from Pseudomonas aeruginosa

Seattle Structural Genomics Center for Infectious Disease (SSGCID), Delker, S.L., Dranow, D.M., Lorimer, D., Edwards, T.E.

To be published.

Macromolecule Content

Total Structure Weight: 279.79 kDa
Atom Count: 21,507
Modelled Residue Count: 2,530
Deposited Residue Count: 2,610
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glutamate-1-semialdehyde 2,1-aminomutase	A, B, C, D, E A, B, C, D, E, F	435	Pseudomonas aeruginosa PAO1	Mutation(s): 0 Gene Names: hemL, PA3977 EC: 5.4.3.8
UniProt
Find proteins for P48247 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore P48247 Go to UniProtKB: P48247
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P48247
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
LEU Query on LEU Download Ideal Coordinates CCD File SDF format, chain P [auth F] MOL2 format, chain P [auth F]	P [auth F]	LEUCINE C₆ H₁₃ N O₂ ROHFNLRQFUQHCH-YFKPBYRVSA-N		Interactions Focus chain P [auth F] Interactions & Density Focus chain P [auth F]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain G [auth A] SDF format, chain J [auth C] MOL2 format, chain G [auth A] MOL2 format, chain J [auth C]	G [auth A], J [auth C]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain G [auth A] Focus chain J [auth C] Interactions & Density Focus chain G [auth A] Focus chain J [auth C]
EDO Query on EDO Download Ideal Coordinates CCD File SDF format, chain H [auth A] SDF format, chain K [auth C] SDF format, chain M [auth D] SDF format, chain N [auth D] SDF format, chain O [auth E] SDF format, chain Q [auth F] SDF format, chain I [auth B] SDF format, chain L [auth C] SDF format, chain R [auth F] SDF format, chain S [auth F] MOL2 format, chain H [auth A] MOL2 format, chain K [auth C] MOL2 format, chain M [auth D] MOL2 format, chain N [auth D] MOL2 format, chain O [auth E] MOL2 format, chain Q [auth F] MOL2 format, chain I [auth B] MOL2 format, chain L [auth C] MOL2 format, chain R [auth F] MOL2 format, chain S [auth F]	H [auth A] I [auth B] K [auth C] L [auth C] M [auth D] H [auth A], I [auth B], K [auth C], L [auth C], M [auth D], N [auth D], O [auth E], Q [auth F], R [auth F], S [auth F]	1,2-ETHANEDIOL C₂ H₆ O₂ LYCAIKOWRPUZTN-UHFFFAOYSA-N		Interactions Focus chain H [auth A] Focus chain I [auth B] Focus chain K [auth C] Focus chain L [auth C] Focus chain M [auth D] Focus chain N [auth D] Focus chain O [auth E] Focus chain Q [auth F] Focus chain R [auth F] Focus chain S [auth F] Interactions & Density Focus chain H [auth A] Focus chain I [auth B] Focus chain K [auth C] Focus chain L [auth C] Focus chain M [auth D] Focus chain N [auth D] Focus chain O [auth E] Focus chain Q [auth F] Focus chain R [auth F] Focus chain S [auth F]