5I8E

Crystal Structure of Broadly Neutralizing HIV-1 Fusion Peptide-Targeting Antibody VRC34.01 Fab


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 5I8E

Classification: IMMUNE SYSTEM

Total Structure Weight: 93751.98

Macromolecule Entities
Molecule Chains Length Organism Details
VRC34.01 Fab heavy chain A, C 222 Homo sapiens
VRC34.01 Fab light chain B, D 210 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.186
  • Space Group: I 4

Unit Cell:

Length (Å) Angle (°)
a = 114.61 α = 90.00
b = 114.61 β = 90.00
c = 174.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-02-18
  • Released Date: 2016-05-25
  • Deposition author(s): Xu, K., Zhou, T., Liu, K., Kwong, P.D.

Revision History

  • Version 1_0: 2016-05-25

    Type: Initial release

  • Version 1_1: 2017-09-20

    Type: Author supporting evidence, Database references, Derived calculations