Structural insights into a novel class of aspartate aminotransferase from Corynebacterium glutamicum
Son, H.-F., Kim, K.-J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ASPARTATE AMINOTRANSFERASE | 432 | Corynebacterium glutamicum ATCC 13032 | Mutation(s): 0  Gene Names: aspB, cg0294 EC: 2.6.1.1 | ||
UniProt | |||||
Find proteins for Q8NTR2 (Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)) Explore Q8NTR2  Go to UniProtKB:  Q8NTR2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8NTR2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PMP Query on PMP | C [auth A] | 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE C8 H13 N2 O5 P ZMJGSOSNSPKHNH-UHFFFAOYSA-N | |||
PLP Query on PLP | F [auth B] | PYRIDOXAL-5'-PHOSPHATE C8 H10 N O6 P NGVDGCNFYWLIFO-UHFFFAOYSA-N | |||
GLU Query on GLU | G [auth B] | GLUTAMIC ACID C5 H9 N O4 WHUUTDBJXJRKMK-VKHMYHEASA-N | |||
AKG Query on AKG | D [auth A] | 2-OXOGLUTARIC ACID C5 H6 O5 KPGXRSRHYNQIFN-UHFFFAOYSA-N | |||
GOL Query on GOL | E [auth A], H [auth B], I [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 103.388 | α = 90 |
b = 53.521 | β = 104.23 |
c = 170.224 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data collection |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
HKL-2000 | phasing |
Funding Organization | Location | Grant Number |
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National Research Foundation of Korea | Korea, Republic Of | 2014R1A2A2A01005752 |
National Research Foundation of Korea | Korea, Republic Of | 2014M1M2M2033626 |
National Research Foundation of Korea | Korea, Republic Of | 2015H1A2A1034233 |