5H5O

A cyclic-GMP-dependent signalling pathway regulates bacterial phytopathogenesis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.12 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.223

Literature

Macromolecules
Sequence Display for 5H5O

Classification: BIOSYNTHETIC PROTEIN

Total Structure Weight: 29688.00

Macromolecule Entities
Molecule Chains Length Organism Details
Diguanylate cyclase A, B 129 Xanthomonas campestris Fragment: UNP residues 23-151
Gene Name(s): xcc-b100_0261
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PCG
Query on PCG

A, B CYCLIC GUANOSINE MONOPHOSPHATE
C10 H12 N5 O7 P
ZOOGRGPOEVQQDX-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.12 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.223
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 48.65 α = 90.00
b = 48.65 β = 90.00
c = 118.09 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-11-08
  • Released Date: 2017-05-24
  • Deposition author(s): Chin, K.H., Chou, S.-H.
  • This entry supercedes: 4KG1

Revision History

  • Version 1_0: 2017-05-24

    Type: Initial release