5GR5

Crystal structure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.187 
  • R-Value Work: 0.151 
  • R-Value Observed: 0.153 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural basis for substrate binding and catalysis of branching enzyme from Cyanothece sp. ATCC 51142

Hayashi, M.Suzuki, R.Colleoni, C.Ball, S.G.Fujita, N.Suzuki, E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
1,4-alpha-glucan branching enzyme GlgB793Crocosphaera subtropica ATCC 51142Mutation(s): 1 
Gene Names: glgBglgB1cce_2248
EC: 2.4.1.18
UniProt
Find proteins for B1WPM8 (Crocosphaera subtropica (strain ATCC 51142 / BH68))
Explore B1WPM8 
Go to UniProtKB:  B1WPM8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB1WPM8
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.187 
  • R-Value Work: 0.151 
  • R-Value Observed: 0.153 
  • Space Group: P 41 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 133.87α = 90
b = 133.87β = 90
c = 185.01γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Shimadzu Science FoundationJapan120003
JSPS KAKENHIJapan15K18685
JSPS KAKENHIJapan25440193

Revision History  (Full details and data files)

  • Version 1.0: 2017-08-16
    Type: Initial release
  • Version 1.1: 2023-11-08
    Changes: Data collection, Database references, Derived calculations, Refinement description