5F8S

Crystal structure of a Crenomytilus grayanus lectin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.08 Å
  • R-Value Free: 0.131
  • R-Value Work: 0.114

Literature

Macromolecules
Sequence Display for 5F8S

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 36501.27

Macromolecule Entities
Molecule Chains Length Organism Details
GalNAc/Gal-specific lectin A, B 156 Crenomytilus grayanus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.08 Å
  • R-Value Free: 0.131
  • R-Value Work: 0.114
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 52.84 α = 90.00
b = 71.06 β = 90.00
c = 93.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-12-09
  • Released Date: 2016-04-06
  • Deposition author(s): Liao, J.-H., Huang, K.-F., Tu, I.-F., Lee, I.-M., Wu, S.-H.

Revision History

  • Version 1_0: 2016-04-06

    Type: Initial release

  • Version 1_1: 2016-04-27

    Type: Database references