5DSY

Crystal structure of constitutively active PARP-2

Structural Biology Knowledgebase: 5DSY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 5DSY

Classification: TRANSFERASE

Total Structure Weight: 128853.77

Macromolecule Entities
Molecule Chains Length Organism Details
Poly [ADP-ribose] polymerase 2 A, B, C, D 280 Homo sapiens EC#: 2.4.2.30 IUBMB
Fragment: unp residues 348-583
Gene Name(s): PARP2 Gene View ADPRT2 ADPRTL2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UHB
Query on UHB

A, B, C, D 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)- 3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin- 1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol- 4-yl)ethanamide
C24 H27 N9 O6
QEUOCRGVJJDDTK-VBFAUCSFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.193
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 92.16 α = 90.00
b = 119.90 β = 90.00
c = 120.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-09-17
  • Released Date: 2016-07-27
  • Deposition author(s): Riccio, A.A., Pascal, J.M.

Revision History

No revisions since initial release