5CFQ

Crystal structure of anemone STING (Nematostella vectensis) in complex with 2',3' cGAMP, c[G(2',5')pA(3',5')p]


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.242

Literature

Macromolecules
Sequence Display for 5CFQ

Classification: IMMUNE SYSTEM

Total Structure Weight: 44317.98

Macromolecule Entities
Molecule Chains Length Organism Details
Stimulator of Interferon Genes A, B 187 Nematostella vectensis Fragment: UNP residues 193-377
Gene Name(s): v1g246111
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1SY
Query on 1SY

B cGAMP
2',3' cGAMP, c-GMP-AMP, c[G(2',5')pA(3',5')p] (Synonym)
C20 H24 N10 O13 P2
XRILCFTWUCUKJR-INFSMZHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.242
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 40.50 α = 90.00
b = 77.97 β = 90.00
c = 101.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-07-08
  • Released Date: 2015-08-26
  • Deposition author(s): Kranzusch, P.J., Wilson, S.C., Lee, A.S.Y., Berger, J.M., Doudna, J.A., Vance, R.E.

Revision History

  • 2015-09-30
    Type: Citation | Details: Citation
  • 2015-09-09
    Type: Citation | Details: Citation