4Z9R

Crystal structure of PfaD from Shewanella oneidensis in complex with NAD+ determined by in-situ diffraction.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.214 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of PfaD from Shewanella oneidensis in complex with NAD+ determined by in-situ diffraction.

Baker, G.E.Race, P.R.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Omega-3 polyunsaturated fatty acid synthase subunit PfaD
A, B
547Shewanella oneidensis MR-1Mutation(s): 0 
Gene Names: pfaDSO_1597
UniProt
Find proteins for Q8EGK4 (Shewanella oneidensis (strain MR-1))
Explore Q8EGK4 
Go to UniProtKB:  Q8EGK4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8EGK4
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.214 
  • Space Group: P 41 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 106.68α = 90
b = 106.68β = 90
c = 217.477γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
PHASERphasing
Cootmodel building
XDSdata reduction
Aimlessdata scaling

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-04-06
    Type: Initial release
  • Version 1.1: 2024-01-10
    Changes: Data collection, Database references, Refinement description