4S1J

Crystal structure of cyclophilin mutant V33A from Leishmania donovani at 2.3 angstrom.

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.290 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

Characterization and prediction of thermal stability of cyclophilin mutants from L.donovani

Roy, S., Datta, A.K., Banerjee, R.

To be published.

Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Peptidyl-prolyl cis-trans isomerase
A, B
172Leishmania donovani BPK282A1Mutation(s): 1 
Gene Names: CYP, LDBPK_060120
EC: 5.2.1.8
UniProt
Find proteins for A0A3S5H5N2 (Leishmania donovani)
Explore A0A3S5H5N2 
Go to UniProtKB:  A0A3S5H5N2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A3S5H5N2
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.290 
  • Space Group: P 43
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 48.534α = 90
b = 48.534β = 90
c = 141.696γ = 90
Software Package:
Software NamePurpose
CrystalCleardata collection
AMoREphasing
CNSrefinement
CrystalCleardata reduction
CrystalCleardata scaling

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-03-04
    Type: Initial release
  • Version 1.1: 2023-09-20
    Changes: Data collection, Database references, Refinement description