4NKQ

Structure of a Cytokine Receptor Complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 4NKQ

Classification: CYTOKINE / CYTOKINE RECEPTOR

Total Structure Weight: 97486.58

Macromolecule Entities
Molecule Chains Length Organism Details
Cytokine receptor common subunit beta A 414 Homo sapiens Mutation: N346Q
Gene Name(s): CSF2RB Gene View IL3RB IL5RB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Granulocyte-macrophage colony-stimulating factor C 127 Homo sapiens Gene Name(s): CSF2 Gene View GMCSF
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Granulocyte-macrophage colony-stimulating factor receptor subunit alpha B 305 Homo sapiens Gene Name(s): CSF2RA Gene View CSF2R CSF2RY
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
UNK
Query on UNK
B L-PEPTIDE LINKING C4 H9 N O2 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.229
  • Space Group: P 63 2 2

Unit Cell:

Length (Å) Angle (°)
a = 166.66 α = 90.00
b = 166.66 β = 90.00
c = 213.13 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-11-13
  • Released Date: 2015-09-23
  • Deposition author(s): Parker, M.W., Broughton, S.E.
  • This entry supercedes: 3CXE

Revision History

  • Version 1_0: 2015-09-23

    Type: Initial release

  • Version 1_1: 2016-07-27

    Type: Database references

  • Version 1_2: 2016-09-28

    Type: Database references