4FU0

Crystal Structure of VanG D-Ala:D-Ser Ligase from Enterococcus faecalis

Structural Biology Knowledgebase: 4FU0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4FU0

Classification: LIGASE

Total Structure Weight: 81404.33

Macromolecule Entities
Molecule Chains Length Organism Details
D-alanine--D-alanine ligase 7 A, B 357 Enterococcus faecalis EC#: 6.3.2.4 IUBMB

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A, B ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.189
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 116.07 α = 90.00
b = 116.07 β = 90.00
c = 177.23 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-06-28
  • Released Date: 2012-09-19
  • Deposition author(s): Meziane-Cherif, D., Saul, F.A., Haouz, A., Courvalin, P.

Revision History

  • 2013-03-13
    Type: Citation | Details: Citation update