X-ray Crystal Structure of 28-O-Methylrapamycin complexed with FKBP12: Is the Cyclohexyl Moiety Part of the Effector Domain of Rapamycin?
4DH0
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Isomerase/immunosuppressant
    Structure Weight: 12764.81
    Molecule: Peptidyl-prolyl cis-trans isomerase FKBP1A
    Polymer: 1 Type: protein Length: 107
    Chains: A
    EC#: 5.2.1.8   
    Organism: Homo sapiens
    Gene Names: Gene View for FKBP1A FKBP1 FKBP12
    UniProtKB: Protein Feature View | Search PDB | P62942  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1fkl   The same protein complexed with rapamycin. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MR8
    Search 
    Download 
    MR8 C52 H81 N O13
    28-O-Methylrapamycin
    MR8:4DH0
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Kallen, J.

    Deposition:   2012-01-27
    Release:   2012-02-15
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.10
    R-Value: 0.219 (obs.)
    R-Free: 0.257
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 45.50 α = 90.00 
    b = 49.70 β = 90.00 
    c = 55.30 γ = 90.00