4YHM

Reversal Agent for Dabigatran


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.16 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.170

Literature

Macromolecules
Sequence Display for 4YHM

Classification: IMMUNE SYSTEM

Total Structure Weight: 48203.81

Macromolecule Entities
Molecule Chains Length Organism Details
aDabi-Fab2b heavy chain H 222 Homo sapiens
aDabi-Fab2b light chain L 219 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
4CC
Query on 4CC

H N-[(2-{[(4-carbamimidoylphenyl)amino]methyl}- 1-methyl-1H-benzimidazol-5-yl)carbonyl]-N- pyridin-2-yl-beta-alanine
C25 H25 N7 O3
YBSJFWOBGCMAKL-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.16 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.170
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 59.97 α = 90.00
b = 78.39 β = 90.00
c = 87.67 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-02-27
  • Released Date: 2016-01-13
  • Deposition author(s): Schiele, F., Nar, H.

Revision History

  • Version 1_0: 2016-01-13

    Type: Initial release