4Y65

Crystal structure of E.coli CutA1 C16A/C39A/C79A mutation

PDB DOI: https://doi.org/10.2210/pdb4Y65/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Escherichia coli K-12
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2015-02-12 Released: 2015-04-15
Deposition Author(s): Tanaka, T., Matsuura, Y., Yutani, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.223
R-Value Work: 0.191

wwPDB Validation 3D Report Full Report

This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of E.coli CutA1 C16A/C39A/C79A mutation

Tanaka, T., Matsuura, Y., Yutani, K.

To be published.

Macromolecule Content

Total Structure Weight: 36.74 kDa
Atom Count: 2,779
Modelled Residue Count: 325
Deposited Residue Count: 336
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Divalent-cation tolerance protein CutA	A, B, C	112	Escherichia coli K-12	Mutation(s): 3 Gene Names: cutA, cutA1, cycY, b4137, JW4097
UniProt
Find proteins for P69488 (Escherichia coli (strain K12)) Explore P69488 Go to UniProtKB: P69488
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P69488
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.223
R-Value Work: 0.191
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 49.729	α = 90
b = 62.016	β = 118.47
c = 50.238	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
PDB_EXTRACT	data extraction
SCALEPACK	data reduction
HKL-2000	data scaling
MOLREP	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2015-04-15

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2015-04-15
Type: Initial release
Version 1.1: 2015-11-18
Changes: Experimental preparation
Version 1.2: 2020-02-05
Changes: Data collection, Derived calculations
Version 1.3: 2024-03-20
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.