Crystal Structure of Human Presequence Protease in Complex with Inhibitor MitoBloCK-60
Mo, S.M., Liang, W.G., King, J.V., Wijaya, J., Koehler, C.M., Tang, W.J.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Presequence protease, mitochondrial | 1,014 | Homo sapiens | Mutation(s): 1  Gene Names: PITRM1, KIAA1104, MP1 EC: 3.4.24 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q5JRX3 (Homo sapiens) Explore Q5JRX3  Go to UniProtKB:  Q5JRX3 | |||||
PHAROS:  Q5JRX3 GTEx:  ENSG00000107959  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5JRX3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Presequence protease, mitochondrial | 1,014 | Homo sapiens | Mutation(s): 1  Gene Names: PITRM1, KIAA1104, MP1 EC: 3.4.24 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q5JRX3 (Homo sapiens) Explore Q5JRX3  Go to UniProtKB:  Q5JRX3 | |||||
PHAROS:  Q5JRX3 GTEx:  ENSG00000107959  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5JRX3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
3UE Query on 3UE | D [auth A], E [auth A], U [auth B], V [auth B] | [4-(diphenylmethyl)piperazin-1-yl](3-methyl-4-nitrophenyl)methanone C25 H25 N3 O3 FJZPDGSOVGNVJO-UHFFFAOYSA-N | |||
GOL Query on GOL | AA [auth B] BA [auth B] CA [auth B] F [auth A] G [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ZN Query on ZN | C [auth A], T [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
ACT Query on ACT | DA [auth B] EA [auth B] FA [auth B] GA [auth B] HA [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
CA Query on CA | IA [auth B], JA [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Modified Residues 3 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CAS Query on CAS | A | L-PEPTIDE LINKING | C5 H12 As N O2 S | CYS | |
MLY Query on MLY | A | L-PEPTIDE LINKING | C8 H18 N2 O2 | LYS | |
MLZ Query on MLZ | A | L-PEPTIDE LINKING | C7 H16 N2 O2 | LYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 245.624 | α = 90 |
b = 85.49 | β = 127.53 |
c = 158.214 | γ = 90 |
Software Name | Purpose |
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HKL-3000 | data collection |
PHASER | phasing |
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |