Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-fluorocytosine
Fedorov, A.A., Fedorov, E.V., Hitchcock, D.S., Raushel, F.M., Almo, S.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytosine deaminase | 431 | Klebsiella pneumoniae 30660/NJST258_1 | Mutation(s): 0  Gene Names: KPNJ1_03949 EC: 3.5.4.1 | ||
UniProt | |||||
Find proteins for A0A0E1CHI1 (Klebsiella pneumoniae 30660/NJST258_1) Explore A0A0E1CHI1  Go to UniProtKB:  A0A0E1CHI1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0E1CHI1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 7 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FLC Query on FLC | DB [auth E] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K | |||
1LD Query on 1LD | DA [auth C] G [auth A] GB [auth F] LA [auth D] S [auth B] | 5-fluorocytosine C4 H4 F N3 O XRECTZIEBJDKEO-UHFFFAOYSA-N | |||
PEG Query on PEG | LB [auth F], W [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
GOL Query on GOL | FA [auth C] FB [auth F] GA [auth C] HA [auth C] I [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
EDO Query on EDO | AA [auth B] BA [auth B] CA [auth B] EB [auth E] JA [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
ACY Query on ACY | AB [auth E] BB [auth E] CB [auth E] IA [auth C] JB [auth F] | ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N | |||
FE2 Query on FE2 | EA [auth C] H [auth A] HB [auth F] MA [auth D] T [auth B] | FE (II) ION Fe CWYNVVGOOAEACU-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 101.954 | α = 90 |
b = 162.419 | β = 90 |
c = 184.047 | γ = 90 |
Software Name | Purpose |
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CBASS | data collection |
BALBES | phasing |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |