4PPE

human RNF4 RING domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 4PPE

Classification: LIGASE

Total Structure Weight: 16794.78

Macromolecule Entities
Molecule Chains Length Organism Details
E3 ubiquitin-protein ligase RNF4 A, B 76 Homo sapiens EC#: 6.3.2 IUBMB
Fragment: hRNF4 RING domain
Gene Name(s): RNF4 Gene View SNURF Gene View RES4-26
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.230
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 59.94 α = 90.00
b = 86.99 β = 90.00
c = 22.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-02-26
  • Released Date: 2014-03-26
  • Deposition author(s): Perry, J.J., Arvai, A.S., Hitomi, C., Tainer, J.A.

Revision History

  • 2015-02-25
    Type: Database references