Crystal structure of the bacterial A1408U-mutant ribosomal decoding site (C2 form 2)
Kondo, J., Koganei, M.To be published.
Experimental Data Snapshot
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
5'-R(*UP*UP*GP*CP*GP*UP*CP*UP*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3' | 23 | synthetic construct | |||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA Query on CA | C [auth A], E [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
NA Query on NA | D [auth A], F [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 86.45 | α = 90 |
b = 31.69 | β = 116.34 |
c = 49.41 | γ = 90 |
Software Name | Purpose |
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CrystalClear | data collection |
PHENIX | phasing |
CNS | refinement |
PDB_EXTRACT | data extraction |
d*TREK | data reduction |
d*TREK | data scaling |
Funding Organization | Location | Grant Number |
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MEXT | Japan | 23790054 |