4ON1

Crystal Structure of metalloproteinase-II from Bacteroides fragilis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.13 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.159

Literature

Macromolecules
Sequence Display for 4ON1

Classification: HYDROLASE

Total Structure Weight: 85065.41

Macromolecule Entities
Molecule Chains Length Organism Details
Putative metalloprotease II A, B 379 Bacteroides fragilis Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.13 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.159
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 44.42 α = 90.00
b = 114.39 β = 90.00
c = 140.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-28
  • Released Date: 2014-04-09
  • Deposition author(s): Aleshin, A.E., Liddington, R.C., Shiryaev, S.A., Strongin, A.Y.

Revision History

  • 2014-06-18
    Type: Database references