4KXZ

crystal structure of tgfb2 in complex with GC2008.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.83 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 4KXZ

Classification: IMMUNE SYSTEM

Total Structure Weight: 241640.13

Macromolecule Entities
Molecule Chains Length Organism Details
Transforming growth factor beta-2 A, B, D, E 112 Homo sapiens Fragment: unp residues 303-414
Gene Name(s): TGFB2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GC1008 Heavy Chain H, J, N, Q 224 Homo sapiens
GC1008 Light Chain I, L, M, P 215 Homo sapiens

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PE5
Query on PE5

P 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
POLYETHYLENE GLYCOL PEG400, (Synonym)
C18 H38 O9
CUDPPTPIUWYGFI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MES
Query on MES

A, E, J, M, Q 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.83 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.183
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 131.20 α = 90.00
b = 359.68 β = 90.00
c = 64.63 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-28
  • Released Date: 2014-09-24
  • Deposition author(s): Mathieu, M., Moulin, A.G., Wei, R.

Revision History

  • Version 1_0: 2014-09-24

    Type: Initial release

  • Version 1_1: 2014-12-03

    Type: Database references