The crystal structure of PDE6D in complex with rac-S1
4JV8
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Protein Binding/inhibitor
    Structure Weight: 18181.99
    Molecule: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
    Polymer: 1 Type: protein Length: 152
    Chains: B
    Organism: Homo sapiens
    Gene Names: PDED Gene View for PDE6D
    UniProtKB: Search PDB | O43924   Protein Feature View
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    4JV6    
    4JVB    
    4JVF    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    1M1
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    1M1 C19 H14 N4
    (6R)-6-(pyridin-2-yl)-5,6-dihydrobenzimidazo[1,2- c]quinazoline
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    1M1
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    1M1
    N/Ain BindingDB
    N/Ain BindingMoad
    Kd: 1420 nM - data from PDBbind  
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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