4JDN

Secreted Chlamydial Protein PGP3, C-terminal Domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 4JDN

Classification: CELL INVASION

Total Structure Weight: 48028.58

Macromolecule Entities
Molecule Chains Length Organism Details
Virulence plasmid protein pGP3-D A, B, C 152 Chlamydia trachomatis Fragment: C-terminal domain (unp residues 113-264)
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.155
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 78.60 α = 90.00
b = 78.60 β = 90.00
c = 129.07 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-25
  • Released Date: 2013-06-05
  • Deposition author(s): Galaleldeen, A., Taylor, A.B., Chen, D., Holloway, S.P., Zhong, G., Hart, P.J.

Revision History

  • Version 1_0: 2013-06-05

    Type: Initial release

  • Version 1_1: 2013-07-17

    Type: Database references

  • Version 1_2: 2013-10-09

    Type: Database references