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Crystal structure of EvaA, a 2,3-dehydratase in complex with dTDP-fucose and dTDP-rhamnose
4J7G
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Biosynthetic Protein
    Structure Weight: 108196.13
    Molecule: EvaA 2,3-dehydratase
    Polymer: 1 Type: protein Length: 471
    Chains: A, B
    Mutation: R381A
    Organism Amycolatopsis orientalis
    UniProtKB:   Protein Feature View | Search PDB | O52793  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Amycolatopsis orientalis   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    4J7H   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    1JB
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    1JB C16 H26 N2 O15 P2
    [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin- 1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl- phosphoryl] [(2R,3R,4S,5R,6R)-6-methyl-3,4,5- tris(oxidanyl)oxan-2-yl] hydrogen phosphate
    1JB:4J7G
    TRH
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    TRH C16 H26 N2 O15 P2
    2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE
    TRH:4J7G
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Holden, H.M.,  Kubiak, R.L.,  Thoden, J.B.

    Deposition:   2013-02-13
    Release:   2013-05-22
    Last Modified (REVDAT):   2013-12-25
     
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    2013-12-25
    Citation
    2013-11-20
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.70
    R-Value: 0.173 (obs.)
    R-Free: 0.197
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 105.83 α = 90.00 
    b = 108.22 β = 90.00 
    c = 110.21 γ = 90.00