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Crystal structure of thymidine kinase from herpes simplex virus type 1 in complex with IN52/10
4IVR
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 72231.43
    Molecule: Thymidine kinase
    Polymer: 1 Type: protein Length: 331
    Chains: A, B
    EC#: 2.7.1.21   
    Fragment: UNP residues 46-376
    Organism: Herpes simplex virus (type 1 / strain 17)
    Gene Names: TK UL23
    UniProtKB: Protein Feature View | Search PDB | P03176  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Human herpesvirus 1   Taxonomy   Common Name: Hhv-1 Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1E2P  Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with DHBT 
    3F0T  Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with N-methyl-DHBT 
    3RDP  Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with N-methyl-FHBT 
    4IVP  Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with IN51/20 
    4IVQ  Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with IN43/5 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    N50
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    N50 C11 H16 N2 O4
    2-[(2,6-dimethoxy-5-methylpyrimidin-4-yl)methylidene]propane- 1,3-diol
    N50:4IVR
    SO4
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    SO4 O4 S
    SULFATE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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