The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli
Bhandari, V., Sugiman-Marangos, S.N., Naushad, H.S., Gupta, R.S., Junop, M.S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA-directed RNA polymerase subunit beta' | 250 | Escherichia coli K-12 | Mutation(s): 1  Gene Names: b3988, JW3951, rpoC, RPOC subunit beta', tabB EC: 2.7.7.6 | ||
UniProt | |||||
Find proteins for P0A8T7 (Escherichia coli (strain K12)) Explore P0A8T7  Go to UniProtKB:  P0A8T7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A8T7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
IOD Query on IOD | AA [auth B] AB [auth D] BA [auth B] BB [auth D] CA [auth B] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M | |||
NA Query on NA | JA [auth B] KB [auth D] PB [auth E] U [auth A] V [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D, E | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 198.06 | α = 90 |
b = 65.63 | β = 108.92 |
c = 81.292 | γ = 90 |
Software Name | Purpose |
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CBASS | data collection |
PHENIX | model building |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHENIX | phasing |