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Crystal structure of Trichinella spiralis UCH37 bound to Ubiquitin vinyl methyl ester
4IG7
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/signaling Protein
    Structure Weight: 47448.01
    Molecule: Ubiquitin C-terminal hydrolase 37
    Polymer: 1 Type: protein Length: 343
    Chains: A
    Organism: Trichinella spiralis
    Gene Name: Tsp_07066
    UniProtKB: Protein Feature View | Search PDB | E5S6X1  
    Molecule: Ubiquitin
    Polymer: 2 Type: protein Length: 75
    Chains: B
    Organism: Homo sapiens
    Gene Name: Gene View for UBC
    UniProtKB: Protein Feature View | Search PDB | P0CG48  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Trichinella spiralis   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3IHR  Structure of full-length, human protein 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GVE
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    GVE C5 H11 N O2
    METHYL 4-AMINOBUTANOATE
    GVE:4IG7
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Das, C.,  Kim, M.I.,  Morrow, M.E.

    Deposition:   2012-12-16
    Release:   2013-05-29
    Last Modified (REVDAT):   2014-01-15
     
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    2014-01-15
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.195 (obs.)
    R-Free: 0.240
    Space Group: H 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 147.36 α = 90.00 
    b = 147.36 β = 90.00 
    c = 40.49 γ = 120.00