4IG7

Crystal structure of Trichinella spiralis UCH37 bound to Ubiquitin vinyl methyl ester

Structural Biology Knowledgebase: 4IG7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.193

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4IG7

Classification: Hydrolase / Signaling Protein

Total Structure Weight: 47448.05

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin C-terminal hydrolase 37 A 343 Trichinella spiralis Gene Name(s): Tsp_07066
Ubiquitin B 75 Homo sapiens Gene Name(s): UBC Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GVE
Query on GVE

B METHYL 4-AMINOBUTANOATE
C5 H11 N O2
KVQGGLZHHFGHPU-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.193
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 147.36 α = 90.00
b = 147.36 β = 90.00
c = 40.49 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-16
  • Released Date: 2013-05-29
  • Deposition author(s): Das, C., Kim, M.I., Morrow, M.E.

Revision History

  • 2014-01-15
    Type: Citation | Details: --