Crystal structure of the outer domain of HIV-1 gp120 in complex with VRC-PG04 space group P21 DOI:10.2210/pdb4i3s/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Viral Protein/immune System Structure Weight: 68533.28 Molecule: Outer domain of HIV-1 gp120 (KER2018 OD4.2.2) Polymer: 1 Type: protein Length: 190 Chains: G Organism Human immunodeficiency virus Gene Name env UniProtKB:   Protein Feature View | Search PDB | Q3ZLH8     Molecule: Heavy chain of VRC-PG04 Fab Polymer: 2 Type: protein Length: 228 Chains: H Organism Homo sapiens Molecule: Light chain of VRC-PG04 Fab Polymer: 3 Type: protein Length: 208 Chains: L Organism Homo sapiens     Source Hide Polymer: 1 Scientific Name: Human immunodeficiency virus   Taxonomy   Expression System: Homo sapiens   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Expression System: Homo sapiens   Polymer: 3 Scientific Name: Homo sapiens   Taxonomy   Expression System: Homo sapiens       Related PDB Entries Hide Identifier Details 3ngb    3se8    3se9    3tyg    4I3R        Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 10 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Joyce, M.G.,  Biertumpfel, C.,  Nabel, G.J.,  Kwong, P.D. Deposition:   2012-11-26 Release:   2013-01-09 Last Modified (REVDAT):   2013-02-13     Revision History    Hide Mouse over text for details 2013-02-13 Citation 2013-01-23 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   2.85 R-Value: 0.253 (obs.) R-Free: 0.320 Space Group: P 21 Unit Cell:   Length [Å] Angles [°] a = 47.65 α = 90.00  b = 73.47 β = 100.94  c = 109.29 γ = 90.00      Molecule of the Month Hide Epidermal Growth Factor Nanobodies Antibodies Hemagglutinin