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Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (ACGGTTACGGT)
DOI:10.2210/pdb4hja/pdb   NDB ID: NA2075
4HJA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA Binding Protein
    Structure Weight: 20571.75
    Molecule: Protection of telomeres protein 1
    Polymer: 1 Type: protein Length: 143
    Chains: A
    Fragment: Pot1pC, partial DNA binding domain, residues 198-339
    Mutation: V199D
    Organism Schizosaccharomyces pombe 972h-
    Gene Names pot1 SPAC26H5.06
    UniProtKB:   Protein Feature View | Search PDB | O13988  
    Molecule: DNA (5'-D(*AP*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3')
    Polymer: 2 Type: dna Length: 11
    Chains: B
    Details: telomeric single-stranded DNA, +2 5' variant
    Organism Schizosaccharomyces pombe 972h-
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Schizosaccharomyces pombe   Taxonomy   Common Name: Fission yeast Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (Schizosaccharomyces pombe 972h-)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4HID  The same protein bound to a different ssDNA sequence 
    4HIK  The same protein bound to a different ssDNA sequence 
    4HIM  The same protein bound to a different ssDNA sequence 
    4HIO  The same protein bound to a different ssDNA sequence 
    4HJ5  The same protein bound to a different ssDNA sequence 
    4HJ7  The same protein bound to a different ssDNA sequence 
    4HJ8  The same protein bound to a different ssDNA sequence 
    4HJ9  The same protein bound to a different ssDNA sequence 
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2075
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Dickey, T.H.,  Wuttke, D.S.

    Deposition:   2012-10-12
    Release:   2012-12-12
    Last Modified (REVDAT):   2013-02-27
     
  •   Revision History    Hide
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    2013-02-27
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.10
    R-Value: 0.198 (obs.)
    R-Free: 0.248
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 45.85 α = 90.00 
    b = 56.78 β = 90.00 
    c = 66.26 γ = 90.00