RCSB Protein Data Bank - RCSB PDB - 4HG4 Structure Summary

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Crystal structure of Fab 2G1 in complex with a H2N2 influenza virus hemagglutinin

DOI:10.2210/pdb4hg4/pdb

4HG4

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Primary Citation

Related Citations in PDB Entry (REMARK 1) Hide

Molecular Description

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Classification:	Viral Protein/immune System
Structure Weight:	939778.77

Molecule:

Hemagglutinin HA1

Polymer:

Type:

protein

Length:

327

Chains:

A, B, C, D, E, F, G, H, I

Organism

Influenza A virus (A/Japan/305+/1957(H2N2))

Gene Name

UniProtKB:

| | P03451

Molecule:

Hemagglutinin HA2

Polymer:

Type:

protein

Length:

174

Chains:

a, b, c, d, e, f, g, h, i

Organism

Influenza A virus (A/Japan/305+/1957(H2N2))

Molecule:

Fab 2G1 heavy chain

Polymer:

Type:

protein

Length:

223

Chains:

J, L, N, P, R, T, V, X, Z

Organism

Homo sapiens

Molecule:

Fab 2G1 light chain

Polymer:

Type:

protein

Length:

214

Chains:

K, M, O, Q, S, U, W, Y, z

Organism

Homo sapiens

Source

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Polymer: 1

Scientific Name:

Influenza a virus

Taxonomy

Expression System:

Trichoplusia ni

Polymer: 2

Scientific Name:

Influenza a virus

Taxonomy

Expression System:

Trichoplusia ni

Polymer: 3

Scientific Name:

Homo sapiens

Taxonomy

Common Name:

Human

Expression System:

Homo sapiens

Polymer: 4

Scientific Name:

Homo sapiens

Taxonomy

Common Name:

Human

Expression System:

Homo sapiens

Polymer: 5

Scientific Name:

Synthetic construct

Taxonomy

Polymer: 7

Scientific Name:

Synthetic construct

Taxonomy

Related PDB Entries Hide

Identifier Details

4HFU

Ligand Chemical Component

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Identifier	Formula	Name	Interactions
BMA Search Download	C₆ H₁₂ O₆	BETA-D-MANNOSE		Ligand Explorer
NAG Search Download	C₈ H₁₅ N O₆	N-ACETYL-D-GLUCOSAMINE		Ligand Explorer

External Domain Annotations Hide
Pfam Classification: 7 Domains - data from Pfam
Structural Biology Knowledgebase Data Hide

Data in orange boxes are gathered from external resources (when available).

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Biological Assembly 1

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Biological assembly 1 assigned by authors

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Deposition Summary

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Authors: Xu, R., Wilson, I.A.

Deposition:	2012-10-06
Release:	2013-02-13
Last Modified (REVDAT):	2013-05-22

Revision History Hide

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2013-05-22
Citation

Experimental Details

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Method: X-RAY DIFFRACTION
Exp. Data:
Structure Factors
EDS

Unit Cell:
	Length [Å]	Angles [°]
	a = 126.84	α = 90.00
	b = 133.14	β = 90.00
	c = 812.99	γ = 90.00

Molecule of the Month Hide
Epidermal Growth Factor

Nanobodies

Antibodies

Hemagglutinin