Crystal Structure of New Delhi Metallo-beta-Lactamase-1 A121F mutant from Klebsiella pneumoniae DOI:10.2210/pdb4gyu/pdb

4GYU   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 26505.01 Molecule: Beta-lactamase NDM-1 Polymer: 1 Type: protein Length: 243 Chains: A EC#: 3.5.2.6    Mutation: A121F Organism Klebsiella pneumoniae Gene Name blaNDM-1 UniProtKB:   Protein Feature View | Search PDB | C7C422         Source Hide Polymer: 1 Scientific Name: Klebsiella pneumoniae   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 3RKJ  NDM1, delta-38 construct  3RKK  NDM1, delta-36NY construct  3SBL  NDM1, delta-36NY construct, different crystals form  3SFP  NDM1, delta-36NY construct, one-Zn-bound  3SRX  NDM1, delta-36NY construct, two Cd-bound  4GYQ  NDM1, delta-30 construct, D223A mutant      Ligand Chemical Component Hide Identifier Formula Name Interactions GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer IMD Search  Download  C3 H5 N2 IMIDAZOLE   Ligand Explorer P6G Search  Download  C12 H26 O7 HEXAETHYLENE GLYCOL   Ligand Explorer PEG Search  Download  C4 H10 O3 DI(HYDROXYETHYL)ETHER   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam   GO Terms: 5 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Kim, Y.,  Tesar, C.,  Jedrzejczak, R.,  Babnigg, J.,  Binkowski, T.A.,  Mire, J.,  Sacchettini, J.,  Joachimiak, A.,  Midwest Center for Structural Genomics,  Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MT Deposition:   2012-09-05 Release:   2012-09-26     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.80 R-Value: 0.154 (obs.) R-Free: 0.195 Space Group: P 65 Unit Cell:   Length [Å] Angles [°] a = 101.47 α = 90.00  b = 101.47 β = 90.00  c = 42.68 γ = 120.00