4GY4

Role of the biradical intermediate observed during the turnover of SLAC: A two-domain laccase from Streptomyces coelicolor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.67 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 4GY4

Classification: OXIDOREDUCTASE

Total Structure Weight: 92827.18

Macromolecule Entities
Molecule Chains Length Organism Details
Putative copper oxidase A, B, C 278 Streptomyces coelicolor Fragment: UNP residues 39-316
Mutation: Y108A
Gene Name(s): SCO6712
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PG4
Query on PG4

A, B, C TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CU
Query on CU

A, B, C COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
O
Query on O

A, B, C OXYGEN ATOM
O
XLYOFNOQVPJJNP-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.67 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.215
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 178.44 α = 90.00
b = 178.44 β = 90.00
c = 177.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-05
  • Released Date: 2012-09-19
  • Deposition author(s): Nederlof, I., Gupta, A., Canters, G.W.

Revision History

  • 2012-11-07
    Type: Database references
  • 2013-07-10
    Type: Database references