Crystal structure of the catalytic domain of Human MMP12 in complex with selective phosphinic inhibitor RXP470B DOI:10.2210/pdb4gr0/pdb

4GR0   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/hydrolase Inhibitor Structure Weight: 18568.74 Molecule: Macrophage metalloelastase Polymer: 1 Type: protein Length: 159 Chains: A EC#: 3.4.24.65    Fragment: catalytic domain (UNP residues 106-263) Mutation: F171D Organism Homo sapiens Gene Names MMP12 HME UniProtKB:   Protein Feature View | Search PDB | P39900         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 3LIK  Human MMP12 in complex with non-zinc chelating inhibitor  3LIL  Human MMP12 in complex with non-zinc chelating inhibitor  3LIR  Human MMP12 in complex with non-zinc chelating inhibitor  3LJG  Human MMP12 in complex with non-zinc chelating inhibitor  3TS4  Human MMP12 in complex with L-glutamate motif inhibitor  3TSK  Human MMP12 in complex with L-glutamate motif inhibitor  4EFS  Human MMP12 in complex with L-glutamate motif inhibitor  4GQL  Crystal structure of the catalytic domain of Human MMP12 in complex with selective phosphinic inhibitor RXP470.1  4GR3    4GR8        Biologically Interesting Molecules (BIRD) Hide Identifier Image Name Type Class Chain ID   PRD_000865 Search  N-[(2S)-3-[(R)-(4-BROMOPHENYL)(HYDROXY)PHOSPHORYL]-2-{[3-(3'-CHLOROBIPHENYL-4-YL)-1,2-OXAZOL-5-YL]METHYL}PROPANOYL]-L-ALANYL-L-ALANINAMIDE Peptide-like Enzyme inhibitor A   Ligand Explorer     Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer R4B Search  Download  C31 H31 Br Cl N4 O6 P N-[(2S)-3-[(R)-(4-bromophenyl)(hydroxy)phosphoryl]- 2-{[3-(3'-chlorobiphenyl-4-yl)-1,2-oxazol- 5-yl]methyl}propanoyl]-L-alanyl-L-alaninamide   Ligand Explorer ZN Search  Download  Zn ZINC ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Stura, E.A.,  Vera, L.,  Beau, F.,  Devel, L.,  Cassar-Lajeunesse, E.,  Dive, V. Deposition:   2012-08-24 Release:   2013-02-06 Last Modified (REVDAT):   2013-05-22     Revision History    Hide Mouse over text for details 2013-05-22 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.50 R-Value: 0.188 (obs.) R-Free: 0.218 Space Group: P 21 21 2 Unit Cell:   Length [Å] Angles [°] a = 69.77 α = 90.00  b = 62.76 β = 90.00  c = 37.84 γ = 90.00