4GDP

Yeast polyamine oxidase FMS1, N195A mutant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.203

Literature

Macromolecules
Sequence Display for 4GDP

Classification: OXIDOREDUCTASE

Total Structure Weight: 239521.39

Macromolecule Entities
Molecule Chains Length Organism Details
Polyamine oxidase FMS1 A, B, C, D 516 Saccharomyces cerevisiae EC#: 1.5.3.17 IUBMB
Mutation: N195A
Gene Name(s): FMS1 YMR020W YM9711.09
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B, C, D FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PG4
Query on PG4

A, B, C, D TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.203
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 78.85 α = 78.07
b = 81.89 β = 79.51
c = 104.79 γ = 78.92

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-01
  • Released Date: 2012-10-17
  • Deposition author(s): Taylor, A.B., Adachi, M.S., Hart, P.J., Fitzpatrick, P.F.

Revision History

  • 2013-01-30
    Type: Database references