4FX7

Structure of Sym2 D9V+D55V+D130V+D176V

• PDB DOI: https://doi.org/10.2210/pdb4FX7/pdb

• Classification: LYASE
• Organism(s): Thermotoga maritima MSB8
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2012-07-02 Released: 2013-10-02 
• Deposition Author(s): Sterner, R., Sperl, J.M., Rajendran, C.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.08 Å
• R-Value Free: 0.233 
• R-Value Work: 0.172 
• R-Value Observed: 0.175 

Literature

Structure of Sym2 D9V+D55V+D130V+D176V

Sterner, R., Sperl, J.M., Rajendran, C.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 assigned by authors and generated by PISA (software)

Biological Assembly 4  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 4 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 109.78 kDa 
• Atom Count: 7,577 
• Modelled Residue Count: 960 
• Deposited Residue Count: 1,004 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Imidazole glycerol phosphate synthase subunit HisF	A, B, C, D	251	Thermotoga maritima MSB8	Mutation(s): 7  Gene Names: hisF, TM_1036 EC: 4.1.3
UniProt
Find proteins for Q9X0C6 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9X0C6  Go to UniProtKB:  Q9X0C6

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
PI	E [auth A], F [auth A], G [auth B], H [auth B], I [auth C], J [auth C], K [auth D], L [auth D]	HYDROGENPHOSPHATE ION H O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.08 Å
• R-Value Free: 0.233 
• R-Value Work: 0.172 
• R-Value Observed: 0.175 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 66.616	α = 90
b = 83.265	β = 102.66
c = 80.154	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-10-02 
Deposition Author(s): Sterner, R., Sperl, J.M., Rajendran, C.

Revision History  

• Version 1.0: 2013-10-02
  Type: Initial release
  
• Version 1.1: 2017-06-07
  Changes: Database references, Structure summary
• Version 1.2: 2018-01-24
  Changes: Structure summary
• Version 1.3: 2024-02-28
  Changes: Data collection, Database references, Derived calculations