Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic DOI:10.2210/pdb4fwf/pdb

4FWF   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Oxidoreductase/protein Binding Structure Weight: 92516.00 Molecule: Lysine-specific histone demethylase 1B Polymer: 1 Type: protein Length: 796 Chains: A EC#: 1    Fragment: UNP residues 30-822 Organism Homo sapiens Gene Names KDM1B AOF1 C6orf193 LSD2 UniProtKB:   Protein Feature View | Search PDB | Q8NB78     Molecule: Histone H3.1 Polymer: 2 Type: protein Length: 20 Chains: E Fragment: UNP residues 2-21 Mutation: K4M Organism Homo sapiens Gene Names HIST1H3A H3FA HIST1H3B H3FL HIST1H3C H3FC HIST1H3D H3FB HIST1H3E H3FD HIST1H3F H3FI HIST1H3G H3FH HIST1H3H H3FK HIST1H3I H3FF HIST1H3J H3FJ UniProtKB:   Protein Feature View | Search PDB | P68431         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli   Polymer: 2 Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy         Related PDB Entries Hide Identifier Details 4FWE    4FWJ        Ligand Chemical Component Hide Identifier Formula Name Interactions FAD Search  Download  C27 H33 N9 O15 P2 FLAVIN-ADENINE DINUCLEOTIDE   Ligand Explorer ZN Search  Download  Zn ZINC ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 6 Domains - data from Pfam   GO Terms: 28 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Zhang, Q.,  Chen, Z. Deposition:   2012-07-01 Release:   2013-01-16     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.70 R-Value: 0.207 (obs.) R-Free: 0.237 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 110.44 α = 90.00  b = 98.54 β = 96.08  c = 101.36 γ = 90.00