Crystal structure of GH36 alpha-galactosidase AgaA A355E from Geobacillus stearothermophilus in complex with 1-deoxygalactonojirimycin DOI:10.2210/pdb4fns/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 334685.63 Molecule: Alpha-galactosidase AgaA Polymer: 1 Type: protein Length: 729 Chains: A, B, C, D EC#: 3.2.1.22    Mutation: A355E, F518L, M704V Organism Geobacillus stearothermophilus Gene Name agaA UniProtKB:   Protein Feature View | Search PDB | Q9ALJ4         Source Hide Polymer: 1 Scientific Name: Geobacillus stearothermophilus   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 4FNP    4FNQ    4FNR    4FNT    4FNU        Ligand Chemical Component Hide Identifier Formula Name Interactions DGJ Search  Download  C6 H13 N O4 (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine- 3,4,5-triol   Ligand Explorer EDO Search  Download  C2 H6 O2 1,2-ETHANEDIOL   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam   GO Terms: 4 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Merceron, R.,  Foucault, M.,  Haser, R.,  Mattes, R.,  Watzlawick, H.,  Gouet, P. Deposition:   2012-06-20 Release:   2012-10-03 Last Modified (REVDAT):   2013-02-20     Revision History    Hide Mouse over text for details 2013-02-20 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.60 R-Value: 0.177 (obs.) R-Free: 0.231 Space Group: P 32 2 1 Unit Cell:   Length [Å] Angles [°] a = 150.30 α = 90.00  b = 150.30 β = 90.00  c = 233.36 γ = 120.00