4F6O

Crystal structure of the yeast metacaspase Yca1

Structural Biology Knowledgebase: 4F6O SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.170

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4F6O

Classification: HYDROLASE

Total Structure Weight: 38809.66

Macromolecule Entities
Molecule Chains Length Organism Details
Metacaspase-1 A 350 Saccharomyces cerevisiae EC#: 3.4.22 IUBMB
Gene Name(s): MCA1 YCA1 YOR197W

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DFH
Query on DFH

A 1,1-diphenylethanol
C14 H14 O
GIMDPFBLSKQRNP-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.170
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 114.63 α = 90.00
b = 114.63 β = 90.00
c = 62.10 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-15
  • Released Date: 2012-07-11
  • Deposition author(s): Wong, A.H., Yan, C.Y., Shi, Y.G.

Revision History

No revisions since initial release