4ENK

Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-propylguanine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.04 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.250

Literature

Macromolecules
Sequence Display for 4ENK

Classification: DNA BINDING PROTEIN / DNA

Total Structure Weight: 21647.69


Macromolecule Entities
Molecule Chains Length Organism Details
Alkyltransferase-like protein 1 A 116 Schizosaccharomyces pombe Gene Name(s): atl1 SPAC1250.04c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*CP*CP*AP*TP*GP*(6PO)P*CP*TP*AP*GP*TP*A)-3') B 13 Synthetic construct
DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3') C 13 Synthetic construct

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
6PO
Query on 6PO
B DNA LINKING C13 H20 N5 O7 P DG

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.04 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.250
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 59.50 α = 90.00
b = 59.50 β = 90.00
c = 236.92 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-13
  • Released Date: 2012-06-20
  • Deposition author(s): Tubbs, J.L., Arvai, A.S., Tainer, J.A.

Revision History

  • Version 1_0: 2012-06-20

    Type: Initial release

  • Version 1_1: 2012-08-01

    Type: Database references