4EH5

Human p38 MAP kinase in complex with NP-F4 and RL87

Structural Biology Knowledgebase: 4EH5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.229

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4EH5

Classification: Transferase / Transferase inhibitor

Total Structure Weight: 41759.07

Macromolecule Entities
Molecule Chains Length Organism Details
Mitogen-activated protein kinase 14 A 360 Homo sapiens EC#: 2.7.11.24 IUBMB
Gene Name(s): MAPK14 Gene View CSBP CSBP1 CSBP2 CSPB1 MXI2 SAPK2A

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IRG
Query on IRG

A N~4~-cyclopropyl-2-phenylquinazoline-4,7- diamine
C17 H16 N4
WCANXWUISJCJOB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
0OM
Query on 0OM

A benzyl pyridine-3-carboxylate
Benzyl nicotinate (Synonym)
C13 H11 N O2
KVYGGMBOZFWZBQ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.229
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.08 α = 90.00
b = 74.77 β = 90.00
c = 77.63 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-02
  • Released Date: 2012-12-05
  • Deposition author(s): Over, B., Gruetter, C., Waldmann, H., Rauh, D.

Revision History

  • 2013-01-02
    Type: Citation | Details: Citation update