4EFR

Bombyx mori lipoprotein 7 (crystal form II) at 2.50 A resolution

Structural Biology Knowledgebase: 4EFR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.201

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4EFR

Classification: UNKNOWN FUNCTION

Total Structure Weight: 110549.52

Macromolecule Entities
Molecule Chains Length Organism Details
30kDa protein A, B, C, D 239 Bombyx mori Gene Name(s): LOC101735447

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SCN
Query on SCN

B, C, D THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
0AF
Query on 0AF
A, B, C, D L-PEPTIDE LINKING C11 H12 N2 O3 TRP

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.201
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 35.10 α = 78.79
b = 71.72 β = 89.98
c = 105.12 γ = 75.79

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-30
  • Released Date: 2012-08-29
  • Deposition author(s): Pietrzyk, A.J., Panjikar, S., Bujacz, A., Mueller-Dieckmann, J., Jaskolski, M., Bujacz, G.

Revision History

  • 2013-01-23
    Type: Citation | Details: Citation update