The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10
Tan, K., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA protection during starvation protein | 170 | Yersinia pestis KIM10+ | Mutation(s): 0  Gene Names: dps, y1677, Yersinia pestis, YPO2510, YP_2325 EC: 1.16 | ||
UniProt | |||||
Find proteins for Q7CJ65 (Yersinia pestis) Explore Q7CJ65  Go to UniProtKB:  Q7CJ65 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7CJ65 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | AA [auth F] BA [auth G] DA [auth H] GA [auth J] HA [auth J] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
ZN Query on ZN | CA [auth H] EA [auth I] FA [auth J] IA [auth K] KA [auth L] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 105.414 | α = 90 |
b = 105.102 | β = 90 |
c = 191.834 | γ = 90 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
MOLREP | phasing |
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |