RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddA/dT as the Penultimate Base-pair DOI:10.2210/pdb4dto/pdb   NDB ID: NA1632

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transferase/dna Structure Weight: 114214.52 Molecule: DNA polymerase Polymer: 1 Type: protein Length: 903 Chains: A EC#: 2.7.7.7    Organism Enterobacteria phage RB69 Gene Name 43 UniProtKB:   Protein Feature View | Search PDB | Q38087     Molecule: DNA template Polymer: 2 Type: dna Length: 17 Chains: T Molecule: DNA primer Polymer: 3 Type: dna Length: 13 Chains: P     Source Hide Polymer: 1 Scientific Name: Enterobacteria phage rb69   Taxonomy   Expression System: Escherichia coli   Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 4DTJ    4DTM    4DTN    4DTP    4DTR    4DTS    4DTU    4DTX    4DU1    4DU3    4DU4        Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer DCP Search  Download  C9 H16 N3 O13 P3 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type 3DR Search  C5 H11 O6 P dnaLinking     External Domain Annotations Hide Pfam Classification: 2 Domains - data from Pfam   GO Terms: 12 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: NA1632     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Xia, S.,  Wang, J.,  Konigsberg, W.H. Deposition:   2012-02-21 Release:   2012-06-06 Last Modified (REVDAT):   2012-09-05     Revision History    Hide Mouse over text for details 2012-09-05 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.05 R-Value: 0.187 (obs.) R-Free: 0.225 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 78.24 α = 90.00  b = 119.26 β = 90.00  c = 130.92 γ = 90.00      Molecule of the Month Hide DNA Polymerase