Pharmacological chaperones for human alpha-N-acetylgalactosaminidase DOI:10.2210/pdb4do4/pdb

4DO4   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/hydrolase Inhibitor Structure Weight: 96637.75 Molecule: Alpha-N-acetylgalactosaminidase Polymer: 1 Type: protein Length: 400 Chains: A, B EC#: 3.2.1.49    Fragment: UNP residues 18-411 Mutation: N201Q Organism Homo sapiens Gene Name NAGA UniProtKB:   Protein Feature View | Search PDB | P17050         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Trichoplusia ni   Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Synthetic construct   Taxonomy     Polymer: 9 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 3H53  Complex with glycerol  3H54  Complex with GalNAc  3H55  Complex with Galactose  3IGU  Covalent Complex  4DO5  Complex with DGJ  4DO6  Glucose soak      Ligand Chemical Component Hide Identifier Formula Name Interactions ACY Search  Download  C2 H4 O2 ACETIC ACID   Ligand Explorer BMA Search  Download  C6 H12 O6 BETA-D-MANNOSE   Ligand Explorer CIT Search  Download  C6 H8 O7 CITRIC ACID   Ligand Explorer DJN Search  Download  C8 H16 N2 O4 N-[(3S,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin- 3-yl]acetamide   Ligand Explorer FUC Search  Download  C6 H12 O5 ALPHA-L-FUCOSE   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer MAN Search  Download  C6 H12 O6 ALPHA-D-MANNOSE   Ligand Explorer NAG Search  Download  C8 H15 N O6 N-ACETYL-D-GLUCOSAMINE   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam   GO Terms: 13 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Clark, N.E.,  Garman, S.C. Deposition:   2012-02-09 Release:   2012-10-10 Last Modified (REVDAT):   2012-11-21     Revision History    Hide Mouse over text for details 2012-11-21 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   1.40 R-Value: 0.143 (obs.) R-Free: 0.178 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 154.05 α = 90.00  b = 114.62 β = 95.82  c = 68.63 γ = 90.00