4DD9

EVAL processed HEWL, carboplatin DMSO paratone

Structural Biology Knowledgebase: 4DD9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.204

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DD9

Classification: HYDROLASE

Total Structure Weight: 16167.53

Macromolecule Entities
Molecule Chains Length Organism Details
Lysozyme C A 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Fragment: UNP residues 19-147
Gene Name(s): LYZ Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
QPT
Query on QPT

A carboplatin
C6 H12 N2 O4 Pt
BHKICZDKIIDMNR-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DMS
Query on DMS

A DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.204
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 78.04 α = 90.00
b = 78.04 β = 90.00
c = 36.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-18
  • Released Date: 2012-04-25
  • Deposition author(s): Tanley, S.W., Schreurs, A.M., Kroon-Batenburg, L.M., Meredith, J., Prendergast, R., Walsh, D., Bryant, P., Levy, C., Helliwell, J.R.

Revision History

  • 2013-01-23
    Type: Citation | Details: Citation update