POP-OUT | CLOSE
 
Structure of RNA polymerase I at 2.8 A resolution
4C2M
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription
    Structure Weight: 1254203.45
    Molecule: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4
    Polymer: 1 Type: protein Length: 70
    Chains: 1, L
    Organism: Saccharomyces cerevisiae
    Gene Names: RPC10 RPB12 YHR143W-A YHR143BW
    UniProtKB: Protein Feature View | Search PDB | P40422  
    Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49
    Polymer: 2 Type: protein Length: 415
    Chains: 2, M
    Organism: Saccharomyces cerevisiae
    Gene Names: RPA49 RRN13 YNL248C N0880
    UniProtKB: Protein Feature View | Search PDB | Q01080  
    Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA34
    Polymer: 3 Type: protein Length: 233
    Chains: 3, N
    Organism: Saccharomyces cerevisiae
    Gene Names: RPA34 YJL148W J0637
    UniProtKB: Protein Feature View | Search PDB | P47006  
    Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43
    Polymer: 4 Type: protein Length: 326
    Chains: 4, G, O, V
    Organism: Saccharomyces cerevisiae
    Gene Names: RPA43 RRN12 YOR340C O6271
    UniProtKB: Protein Feature View | Search PDB | P46669  
    Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190
    Polymer: 5 Type: protein Length: 1664
    Chains: A, P
    EC#: 2.7.7.6   
    Organism: Saccharomyces cerevisiae
    Gene Names: RPA190 Gene View for RPA1 RRN1 YOR341W O6276
    UniProtKB: Protein Feature View | Search PDB | P10964  
    Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135
    Polymer: 6 Type: protein Length: 1203
    Chains: B, Q
    EC#: 2.7.7.6   
    Organism: Saccharomyces cerevisiae
    Gene Names: RPA135 Gene View for RPA2 RRN2 SRP3 YPR010C YP9531.03C
    UniProtKB: Protein Feature View | Search PDB | P22138  
    Molecule: DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1
    Polymer: 7 Type: protein Length: 335
    Chains: C, R
    Organism: Saccharomyces cerevisiae
    Gene Names: RPC40 RPA5 RPC5 YPR110C P8283.18
    UniProtKB: Protein Feature View | Search PDB | P07703  
    Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14
    Polymer: 8 Type: protein Length: 137
    Chains: D, S
    Organism: Saccharomyces cerevisiae
    Gene Names: RPA14 YDR156W YD8358.11
    UniProtKB: Protein Feature View | Search PDB | P50106  
    Molecule: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1
    Polymer: 9 Type: protein Length: 215
    Chains: E, T
    Organism: Saccharomyces cerevisiae
    Gene Names: RPB5 RPA7 RPC9 YBR154C YBR1204
    UniProtKB: Protein Feature View | Search PDB | P20434  
    Molecule: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2
    Polymer: 10 Type: protein Length: 155
    Chains: F, U
    Organism: Saccharomyces cerevisiae
    Gene Names: RPO26 RPB6 YPR187W P9677.8
    UniProtKB: Protein Feature View | Search PDB | P20435  
    Molecule: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3
    Polymer: 11 Type: protein Length: 146
    Chains: H, W
    Organism: Saccharomyces cerevisiae
    Gene Names: RPB8 YOR224C YOR50-14
    UniProtKB: Protein Feature View | Search PDB | P20436  
    Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12
    Polymer: 12 Type: protein Length: 125
    Chains: I, X
    Organism: Saccharomyces cerevisiae
    Gene Names: RPA12 RRN4 YJR063W J1747
    UniProtKB: Protein Feature View | Search PDB | P32529  
    Molecule: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5
    Polymer: 13 Type: protein Length: 70
    Chains: J, Y
    Organism: Saccharomyces cerevisiae
    Gene Names: RPB10 YOR210W
    UniProtKB: Protein Feature View | Search PDB | P22139  
    Molecule: DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2
    Polymer: 14 Type: protein Length: 142
    Chains: K, Z
    Organism: Saccharomyces cerevisiae
    Gene Names: RPC19 YNL113W N1937
    UniProtKB: Protein Feature View | Search PDB | P28000  
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 2
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 3
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 4
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 5
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 6
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 7
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 8
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 9
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 10
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 11
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 12
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 13
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 14
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SO4
    Search 
    Download 
    SO4 O4 S
    SULFATE ION
    ZN
    Search 
    Download 
    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PQS (software)
Downloadable viewers: